A set of SPARQL examples that are used in different TGX resources
List all homology converted pathways.
PREFIX wp: <http://vocabularies.wikipathways.org/wp#>
PREFIX dc: <http://purl.org/dc/elements/1.1/>
PREFIX cur: <http://vocabularies.wikipathways.org/wp#Curation:>
SELECT DISTINCT ?pathway (str(?title) as ?PathwayTitle) ?organism
WHERE {
?pathway wp:ontologyTag cur:Homology_Converted ;
a wp:Pathway ;
dc:title ?title ;
wp:organismName ?organism .
} ORDER BY ASC(?organism) ASC(?PathwayTitle)
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v5("?PathwayTitle")
v1("?organism"):::projected
v3("?pathway"):::projected
v4("?title"):::projected
c2(["wp:Curation:Homology_Converted"]):::iri
c4(["wp:Pathway"]):::iri
v3 --"wp:ontologyTag"--> c2
v3 --"a"--> c4
v3 --"dc:title"--> v4
v3 --"wp:organismName"--> v1
bind0[/"str(?title)"/]
v4 --o bind0
bind0 --as--o v5