A set of SPARQL examples that are used in different TGX resources
License: https://www.gnu.org/licenses/gpl-3.0
Uses method in: https://github.com/WDscholia/scholia/tree/master/scholia/app/templates/gene_orthologs.sparql
Gene aspect: orthologs
PREFIX bd: <http://www.bigdata.com/rdf#>
PREFIX p: <http://www.wikidata.org/prop/>
PREFIX wdt: <http://www.wikidata.org/prop/direct/>
PREFIX wd: <http://wikidata.org/entity/>
PREFIX wikibase: <http://wikiba.se/ontology#>
PREFIX target: <http://www.wikidata.org/entity/Q14860818>
SELECT
?ortholog ?orthologLabel ?orthologDescription
?taxon ?taxonLabel ?taxonDescription
WITH {
SELECT ?ortholog ?taxon
WHERE {
target: wdt:P31 wd:Q7187;
wdt:P684 ?ortholog .
?ortholog wdt:P703 ?taxon .
}
} AS %result
WHERE {
INCLUDE %result
SERVICE wikibase:label { bd:serviceParam wikibase:language "[AUTO_LANGUAGE],mul,en". }
}
graph TD